Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947578.1_cds_XP_016489212.1_79762
CDS Infomation

[gene=LOC107809128] [db_xref=GeneID:107809128] [protein=putative UDP-rhamnose:rhamnosyltransferase 1] [protein_id=XP_016489212.1] [location=join(6846..7411,7810..8644)] [gbkey=CDS]
Sequence

ATGACTGAAACTAAGAAGCTTCATGTTGTGTTATTCCCATGGTTAGCTTTTGGCCACTTA
ATTCCATTTTTCGAACTTGCTAAGCAAATTGCACGTAAGGGTCACAAAGTTTCCTACATT
TCAACTTCTAGAAATATCGATCGACTCCCAAAACTTTCTCAAAAGTTAAATTACTCCATA
CATTTTGTTAATCTTTCTCTACCTTTAACCAAAGGTCTACCAGAAAACGCAGAGGCCACA
AAAGATGTACCACTTGACAAGGTTCAATACCTCAAGAAAGCCTTTGATGGGCTCGAATCC
GAGTTGACTCAGATCCTCGTAGACTCAGTCCCCGATTGGATCATTTACGATTTTACCCCT
TATTGGTTGCCCCCAATCGCGGGTAAACTCGGAATTTCATGTGCTTTCTTTAGCACGTTT
AATGCATGGTCTAGTGTATTTTTTGGTCCTGCAAAAGACATAATTGATGGTAATGTTCAA
CGGACCAAGCCTGAGGATTTCACCGTTCCACCAAAATGGATCCCTTTTCCATCCAATATA
GCATTCCGTCTCTATGAAATAAACAGGTTTTTTGGCCATGGACAAGAAAACATTTCAGGC
GTCTCCGATTGGCATCGATTTAGGGCATCAGTCTCCGATTGTGACGTGTTTCTTGTACGT
AGTTGTAACGAGTTAGAGAGAGAATGGCTAGATCTTCTTCCACAGCTTCATCAGAAACCT
GTCGTACCAGTTGGCCTATTGCCACCTTCCGTACAAGATACGGAAGGTAACAAAAGGGAT
GCATGGGGTTTTATTAATAATTGGTTAGCCATGCAACGTGAAAAGTCAGTTGTTTACGTA
GCCCTAGGAACGGAGGCAACTCCGAGTCAAGAGGAACTCACTGAGTTAGCTCATGGGTTG
GAGCTATCCGGGTTGCCATTTTTCTGGGCTCTAAGGAAACAACATGATTTTTTATTGTTA
AAATTACCCGAAGGTTTTGAGGAACGTACCAAAAATCGAGGTATAGTTTGGACGAGTTGG
GCTCCGCAACTCAGGATATTGGAACATGACTCAGTAGGTGTTTTTTTGACTCATTGTGGT
TGGGGTTCTATTATAGAAGGACTTAAATTTGGAAAACCCCTTGTTATGTTACCTTTTTTG
GGAGATCAAGCACTAAATGCTAGAGGTTTGGAAGAAAAAATGGTGGGTTTAGAAATTTCA
AGAAATGAAAAGGATGGGTCTTTGACTCGGAACTCAGTGGCTGAGTCACTCAAATTGGTG
ATGAATGATGAGAAGGGAAAAATCTATTGGGAGAAAGCAAATGAAATGAGAAAAATATTT
GGAAATAGAGATTTAAGTGATATATACATAGATGACTTCATTGAGTATCTTCATAAGAAC
AAAAGCCTTTGTATTGATTAA

Peptide Sequence

PEP ID

XP_016489212.1
PEP Infomation

PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tabacum]
Sequence

MTETKKLHVVLFPWLAFGHLIPFFELAKQIARKGHKVSYISTSRNIDRLPKLSQKLNYSI
HFVNLSLPLTKGLPENAEATKDVPLDKVQYLKKAFDGLESELTQILVDSVPDWIIYDFTP
YWLPPIAGKLGISCAFFSTFNAWSSVFFGPAKDIIDGNVQRTKPEDFTVPPKWIPFPSNI
AFRLYEINRFFGHGQENISGVSDWHRFRASVSDCDVFLVRSCNELEREWLDLLPQLHQKP
VVPVGLLPPSVQDTEGNKRDAWGFINNWLAMQREKSVVYVALGTEATPSQEELTELAHGL
ELSGLPFFWALRKQHDFLLLKLPEGFEERTKNRGIVWTSWAPQLRILEHDSVGVFLTHCG
WGSIIEGLKFGKPLVMLPFLGDQALNARGLEEKMVGLEISRNEKDGSLTRNSVAESLKLV
MNDEKGKIYWEKANEMRKIFGNRDLSDIYIDDFIEYLHKNKSLCID

Transcript Sequence

Gene sequence data has not been registered.